Nuts and Bolts
The CBI Nuts & Bolts Users Group meets twice a month in BEB 201 and provides a forum for in depth discussions by researchers about imaging, statistical methods, data analysis techniques and administrative issues. The first portion of the meeting is dedicated to discussion of CBI equipment and administrative issues, and the remainder of the meeting typically consists of a presentation of a discussion topic chosen by the group. Typical discussion topics include details of image formation, multiple compartment connections, functional versus effective connectivity, arterial spin labeling, appropriateness of model fitting, distribution of functional imaging residuals and resting state network analysis.
Upcoming Nuts and Bolts Meetings:
Tuesday, March 11, 2014: 11-12pm (BEB 201)
Tuesday, March 25, 2014: 11-12pm (BEB 201)
Upcoming Pre-Clinical Imaging Meeting:
Tuesday, March 4, 2014: 12-1pm (BEB 201)
CBI study groups are open to everyone and provide in-depth discussions of ongoing research, analysis, and current issues in the field of imaging.
Please email Sandy Bird (firstname.lastname@example.org) to be added to a study group list.
Study Groups follow the schedule below:
|Name||Frequency||Time||Location||Organizer||Agenda for Next Meeting|
|Image Analysis Study Group||By Appointment Only|| ||BEB 236||Ali Tabesh, Ph.D.|| |
|Cancer||1st Thursday of the month||2:30-3:30 pm||CSB 210B||Pierre Giglio, M.D.|| Cancer Study Group 3-6-14|
|Addiction||1st Tuesday of the month||12-1 pm||BEB 302||Joseph Schacht, Ph.D.||Cancelled: Tuesday, March 4, 2014|
|Brain||2nd Tuesday of the month||2-3 pm||CSB 210B||Anya Benitez, Ph.D.|| Brain Study Group 3-11-14|
|Brain Connectivity||3rd Friday of the month||12-1 pm||BEB 201||Jane E. Joseph, Ph.D.|| |
|Cardiovascular Imaging||1st Monday of the month||9-10 am||BEB 201||Joe Schoepf, M.D.|| |
Tuesday, March 4, 2014 (12-1pm)
Pre-Clinical Imaging Lecture (BEB201)
Tong Ye, Ph.D. (Clemson University)
"Optical Molecular Imaging: From Laser Spectroscopy to Microscopy"
Rescheduled! Wednesday, March 12, 2014 (10-4pm)
2nd Annual CBI Open House
Lectures: 10-1pm (BEB 110) Vendor Showcase: 1-4pm (BEB 201)
Rescheduled! Wednesday, March 12, 2014 (11-12pm)
CBI Open House Lecture (BEB 110)
Brent Munsell, Ph.D. (College of Charleston)
"Using Deep Learning to Predict Autism in Infants Prior to 24 Months of Age"
Rescheduled! Wednesday, March 12, 2014 (12-1pm)
CBI Open House Lecture (BEB 110)
Joseph Helpern, Ph.D. (MUSC)
"From Zeugmatography to MRI to the Nobel Prize and Beyond"
Thursday, March 13, 2014 (3:30-5:30pm)
Frontiers in Alzheimer's Disease Research Symposium (BEB110)
3:30-4:30pm: Lotta Granholm-Bentley, Ph.D./D.D.S. (MUSC)
4:30-5:30pm: Ralph A. Nixon, Ph.D., M.D. (NYU Langone Medical Center/Nathan Kline Institute)
5:30-7:30pm: Welcome Reception - 2014 Charleston Conference on Alzheimer's Disease (BEB Lobby)
Introduction to MATLAB and MATLAB Programming Courses
The CBI is now offering a non-credit seminar series.
Time: Wednesday (2pm) and Friday (9am)
(Because of limited seating, 2 sections will be offered on Wednesday at 2:00pm and Friday at 9:00am. There is a limit of 10 attendees per section. 8-10 sessions (possibly more, depending on the level of interest) will be offered, each between 60-90 minutes long.)
Sessions will start the week of January 13, 2014.
Develop a basic working knowledge of MATLAB (notation, syntax, built-in functions).
Learn to use the command line (MATLAB as a calculator).
Learn to develop scripts and functions.
Learn basic programming skills.
Learn to use the debugger to troubleshoot scripts and functions.
Generate 2D and 3D data plots.
Read, write and manipulate numeric data (text files, binary files, Excel).
Read, write, manipulate and display image data.
** No prior programming or MATLAB experience is assumed or required.
If you would like to attend or if you have any questions, please contact Dr. Mark Van Horn (email@example.com).
Download this information as a PDF
Download course materials
Summer Research Program
College of Graduate Studies
Ron Meyer, Ph.D. (Michigan State University): BOLD Mechanisms and Application in Skeletal Muscle
Ed Hui, Ph.D. (University of Texas Health Science Center): Mapping Microstructural Alterations in Ischemic Tissues Using Diffusional Kurtosis Imaging
Ann-Marie Broome, Ph.D., M.B.A. (Case Western Reserve): Molecular Imaging Gets Personal: Targeting the Cancer Signature
Lei Jiang, Ph.D. (Georgia Tech/Emory University): Development and Application of Advanced MRI and Connectivity Modeling Techniques
Juri G. Gelovani, Ph.D. (MD Anderson Cancer Center): Advances in Molecular-Genetic, Epigenetic and Cellular Imagine In vivo
Rod Pettigrew, M.D., Ph.D. (NIBIB): Covergence Science and the Public Health
Chris Richards, Ph.D. (California Institute of Technology): Optical and Spatial Isolation of Membrane Receptors for Single Event Imaging
Els Fieremans, Ph.D. (NYU): Assessment of White Matter Microstructural Integrity with Diffusional Kurtosis Imaging
Jeff Binder, M.D. (Medical College of Wisconsin): fMRI in Anterior Temporal Epilepsy Surgery: The FATES Study
Erik Shapiro, Ph.D. (Yale University): Molecular and Cellular MRI of Cancer: A Theranostic Vision
David Arrington, M.D., Ph.D. (MUSC): Protective Techniques in CT-Guided Percutaneous Hepatic Ablations
Nicole Horst, M.D. (MUSC): Preliminary Evaluation of High Pitch, Dual Source Computed Tomagraphy Enterography for Radiation Exposure Reduction
Ed Hui, Ph.D. (MUSC): Assessment of White Matter Microstructural Integrity with Diffusional Kurtosis Imaging
Dan Boulter, M.D. (MUSC): Prevalence of Missed Infarcts and Other Inaccurate Findings at CT Perfusion for Acute Stroke Patients
Gayatri Joshi, M.D. (MUSC): Cancer Risks Associated with Chest CT
Lei Jiang, Ph.D. (MUSC): Real-Time Motion Tracking and Correction Using Active Markers for Brain MRI
Mark Ahlman, M.D. (MUSC): The Utility of Dual-Point FDG PET for Imaging Neoplasms of the Brain
Andreana Benitez, Ph.D. (MUSC): Cognitive Processing Speed and Diffusional Kurtosis Imaging in Normal Aging, Mild Cognitive Impairment and Alzheimer's Disease
Jim Thrall, M.D. (MUSC): Radiology in the Age of Precision Medicine
Denise Benoit, Ph.D. (Rice University): Engineering nanoparticle-protein associations for protein crystal nucleation and nanoparticle arrangement
Michael Schultz, Ph.D. (University of Iowa Hospital and Clinics): Radiochemistry and Applications for PET Radionuclide Ga-68 – An increasing Role for Molecular Imaging
Vitria Adisetiyo, Ph.D. (NYU): Quantitative Characterization of Brain Microstructure and Iron Homeostasis in Attention-Deficit/Hyperactivity Disorder from Childhood through Adolescence
Yun Zhu, Ph.D. (Georgia State): Dual Inhibition of src and MAPK Potentially Sensitize Chemoresistant Ovarian Cancer Cells
Mark George, M.D. (MUSC): The Exciting History of Brain Imaging Research at MUSC: The Risque Untold Story
Maurice Weaver (Siemens): Applications of micro PET/CT Imaging in Medical Research
Vivek Shinde Patil, Ph.D. (Perkin Elmer): In vivo Imaging of Disease and Therapy
Dominique Duncan, Ph.D. (Yale University): Network Analysis of Intracranial EEG
Ziying Yin, Ph.D. (University of Illinois): MR Imaging and Elastography: Applications to Cartilage Tissue Engineering and Regeneration
Schoepf, Joseph, M.D. (MUSC): Imaging the Heart
Qiu, Deqiang, Ph.D. (Emory University): Quantitative Susceptibilty Mapping and Human Brain Imaging using Ultrasmall Superparamagnetic Iron Oxide
LaRue, Amanda, Ph.D. (MUSC): A Role for Hematopoietic Stem Cells in Bone Repair
Pagel, Marty, Ph.D. (University of Arizona, Tucson, AZ): Picturing the Future of Cancer Health Care with CEST MRI
Nadig, Satish, M.D., Ph.D. (MUSC): Targeted Drug Delivery in Solid Organ Transplantation: An Emerging Concept
Kikinis, Ron, M.D. (Harvard Medical School): Medical Image Computing in the Procedure Room
De Cecco, Carlo, M.D. (MUSC): Dual Energy CT: Cardiovascular and Oncologic Applications
Fadel Zeidan, Ph.D. (Wake Forest University): Brief Mindfulness-Based Mental Training Reduces Pain: Insights from the Brain
Paul Sajda, Ph.D. (Columbia University), Simultaneous EEG-fMRI: Why Bother?
Peisheng Xu, Ph.D. (University of South Carolina), Stimuli-Responsive Polymer Based Nanomaterials for Targeted Drug Delivery